Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002887.1 Hibiscus syriacus cultivar Beakdansim tig00005969_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88196

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7731--7776
14
3.5
13
86
13
60
0
8
10
80
0.91
12682--12722
22
1.9
22
90
5
66
78
0
14
7
0.96
12681--12715
15
2.3
15
85
0
52
77
0
14
8
0.99
13805--13996
43
4.4
43
69
21
128
23
33
20
22
1.97
13892--13966
39
1.9
38
83
2
96
20
37
20
22
1.94
13749--14105
133
2.7
134
90
3
549
25
31
19
24
1.98
14028--14144
43
2.8
40
74
7
119
23
32
18
24
1.97
14301--14353
3
17.0
3
80
7
61
33
1
0
64
1.05
14294--14353
26
2.4
25
81
10
70
33
1
0
65
1.03
19840--19875
18
2.0
18
94
0
63
19
22
30
27
1.98
19855--19930
23
3.2
23
83
3
98
25
19
19
35
1.95
36563--36633
29
2.2
32
73
19
76
61
7
7
23
1.46
36573--36653
29
2.8
29
83
9
94
61
8
8
20
1.51
38399--39148
85
8.9
85
82
4
820
26
18
19
34
1.95
38431--39148
171
4.2
169
85
2
845
26
18
19
35
1.95
38399--40058
256
6.6
255
82
6
1589
26
18
20
34
1.96
39085--39214
66
2.0
65
84
1
170
27
16
20
34
1.95
38999--39301
151
2.0
151
90
0
471
26
17
21
34
1.95
39150--40058
85
10.7
85
81
3
963
26
18
20
34
1.96
38431--39966
402
3.7
411
83
5
1664
26
18
20
34
1.96
39150--40058
171
5.4
171
83
2
1010
26
18
20
34
1.96
41188--41442
95
2.7
95
85
4
334
33
17
16
32
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44359--44420
29
2.1
29
96
0
115
61
8
8
22
1.50
44359--44442
29
2.9
29
84
7
100
59
9
8
22
1.55
51719--52020
150
2.0
151
99
0
597
37
17
10
34
1.83
52046--52116
23
3.0
24
80
15
85
29
23
23
22
1.99
52528--52590
2
32.5
2
93
6
112
50
0
0
49
1.00
52623--52661
21
2.0
21
90
10
64
51
5
0
43
1.24
57059--57142
23
3.7
23
87
3
116
27
27
28
16
1.97
61397--61517
32
4.0
31
82
7
133
33
19
19
28
1.96
61755--61810
2
28.0
2
92
0
94
46
0
0
53
1.00
66153--66276
30
4.0
30
82
6
149
33
20
18
27
1.96
70974--71062
32
2.9
30
83
3
106
34
16
19
29
1.94
71379--71403
2
12.5
2
100
0
50
48
0
0
52
1.00
72796--72847
20
2.6
20
93
0
86
28
19
25
26
1.98
73870--73901
2
16.0
2
100
0
64
50
0
0
50
1.00
74405--74463
23
2.6
23
83
0
64
20
27
25
27
1.99

Tables:   1

The End!