Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002889.1 Hibiscus syriacus cultivar Beakdansim tig00005971_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64328

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9537--9589
21
2.5
20
82
11
54
52
1
9
35
1.45
13391--13491
21
4.7
21
86
4
130
21
30
26
20
1.98
13391--13491
44
2.4
42
86
3
130
21
30
26
20
1.98
28018--28127
43
2.7
40
80
17
102
40
0
2
55
1.20
28027--28079
21
2.7
19
70
13
54
50
0
0
49
1.00
28056--28147
43
2.1
43
82
13
109
36
2
3
57
1.27
42053--42158
2
53.0
2
100
0
212
50
0
0
50
1.00
45307--45374
5
13.8
5
72
9
59
23
2
1
72
1.07
45307--45345
20
2.0
20
100
0
78
25
2
0
71
0.98
45310--45358
20
2.5
20
89
0
71
28
2
2
67
1.13
46074--46219
73
2.0
73
100
0
292
30
13
6
49
1.68
53613--53740
69
1.9
68
86
4
186
28
11
17
41
1.85
59605--59644
15
2.7
15
88
0
62
10
62
17
10
1.53

Tables:   1

The End!