Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002899.1 Hibiscus syriacus cultivar Beakdansim tig00005988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70792

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1501--1562
18
3.6
18
85
14
87
45
19
20
14
1.85
1583--1637
20
2.8
20
91
2
85
14
21
23
40
1.90
1806--1922
41
2.9
40
89
1
162
24
17
25
31
1.97
1798--1918
20
6.0
20
83
1
134
27
18
26
28
1.98
1929--2044
20
5.7
20
65
17
60
31
16
25
26
1.96
2385--2428
17
2.6
18
82
10
56
34
0
4
61
1.16
10566--10618
25
2.1
25
100
0
106
64
16
3
15
1.44
19886--19915
13
2.3
13
100
0
60
13
23
26
36
1.92
34085--34157
35
2.1
35
89
5
112
47
9
8
34
1.66
37662--37716
24
2.3
24
100
0
110
21
30
3
43
1.70
37717--37754
15
2.5
15
100
0
76
26
18
21
34
1.96
43005--43061
25
2.3
26
80
20
68
43
3
7
45
1.48
43109--43147
2
19.0
2
94
5
69
48
2
0
48
1.15
53032--53077
15
3.1
15
81
6
58
67
0
8
23
1.18
53041--53075
14
2.5
14
100
0
70
71
0
5
22
1.07
53336--53427
22
4.0
23
79
13
102
44
2
8
44
1.47
53523--53608
10
8.5
10
78
14
70
24
3
0
72
1.01
53547--53594
16
3.1
16
82
5
64
16
4
0
79
0.89
53546--53604
16
3.6
16
72
22
50
18
5
0
76
0.97

Tables:   1

The End!