Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002901.1 Hibiscus syriacus cultivar Beakdansim tig00005992_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50576

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--40
14
2.1
15
93
6
53
40
33
3
23
1.71
13375--13412
20
1.9
20
88
0
58
23
15
18
42
1.89
13380--13461
42
2.0
42
90
0
128
23
19
20
36
1.95
13676--13718
3
14.0
3
86
13
61
37
0
0
62
0.95
13679--13766
9
9.1
10
72
15
62
42
2
0
55
1.12
20315--20539
96
2.4
96
81
5
276
32
16
24
27
1.96
20485--20539
22
2.7
20
81
10
74
29
14
30
25
1.95
26588--26654
30
2.2
31
83
2
82
34
25
17
22
1.96
26614--26738
31
4.0
32
76
9
114
32
20
18
29
1.96
27677--27815
64
2.2
62
80
6
145
27
23
18
30
1.98
28529--28779
54
4.6
54
85
2
342
28
16
19
35
1.94
34056--34100
21
2.1
21
87
0
63
31
28
24
15
1.96
35792--35854
13
5.5
13
65
27
52
19
26
26
26
1.99
35788--35868
22
3.6
22
96
1
144
18
27
29
24
1.98
37062--37183
61
2.0
61
91
0
199
36
20
19
23
1.95
43270--43492
95
2.3
95
82
4
270
30
16
26
26
1.97
43438--43492
22
2.7
20
86
10
83
27
14
32
25
1.95
43820--44253
54
8.0
54
85
1
555
30
16
19
34
1.93
43831--44309
108
4.4
108
81
5
527
31
16
18
33
1.94

Tables:   1

The End!