Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002909.1 Hibiscus syriacus cultivar Beakdansim tig00006011_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58683

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2399--2463
20
3.0
21
80
11
78
35
44
13
6
1.69
6546--6579
4
8.2
4
96
3
59
73
0
0
26
0.83
6570--6609
20
2.0
20
85
0
53
70
10
2
17
1.27
6983--7148
6
27.7
6
92
0
269
35
30
14
19
1.91
16028--16063
16
2.2
17
90
5
56
75
8
5
11
1.19
23893--24041
27
5.6
27
96
1
266
29
12
15
42
1.84
27741--27889
27
5.6
27
93
1
248
28
12
16
42
1.83
33661--33763
36
2.9
36
88
7
156
30
16
11
41
1.84
37772--37812
16
2.6
16
84
0
55
48
17
2
31
1.60
39027--39137
37
3.0
37
86
4
143
44
2
4
48
1.37
47616--47775
60
2.7
60
79
3
171
41
6
19
33
1.76
48092--48120
15
1.9
15
100
0
58
13
6
10
68
1.37
50304--50369
12
6.0
11
76
13
64
43
0
1
54
1.09
50287--50358
32
2.3
30
86
11
92
47
0
2
50
1.15
50318--50356
18
2.1
19
85
9
53
48
0
0
51
1.00
50337--50373
11
3.3
11
88
3
56
32
0
0
67
0.91
53282--53335
2
27.0
2
100
0
108
50
0
0
50
1.00
57301--57353
21
2.5
21
84
0
70
20
26
20
32
1.98
57343--57529
20
9.3
20
89
2
286
39
19
19
21
1.93
58383--58436
24
2.2
24
93
0
90
20
18
20
40
1.91

Tables:   1

The End!