Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002918.1 Hibiscus syriacus cultivar Beakdansim tig00006032_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87305

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5060--5473
207
2.0
207
96
0
765
37
15
20
26
1.92
12087--12690
85
7.1
85
86
3
693
35
17
21
25
1.95
12087--12690
43
14.3
42
80
2
620
35
17
21
25
1.95
16455--16520
2
33.0
2
100
0
132
50
0
0
50
1.00
18166--18213
24
2.0
25
91
4
80
52
0
0
47
1.00
18168--18221
24
2.2
24
83
6
65
55
1
1
40
1.21
19295--19326
16
1.9
17
93
6
57
21
37
0
40
1.54
19443--19474
15
2.0
17
88
11
50
31
15
6
46
1.71
29001--29070
28
2.5
28
92
2
113
15
20
7
57
1.62
33113--33146
17
2.0
17
88
0
50
64
0
0
35
0.94
34172--34210
17
2.2
17
90
4
60
43
5
0
51
1.24
46670--46703
16
2.1
16
88
0
50
50
0
2
47
1.16
46742--46775
16
2.0
18
88
11
54
26
2
5
64
1.30
47267--47313
23
2.1
21
84
7
58
31
17
17
34
1.92
47240--47487
130
1.9
130
94
0
433
35
12
15
36
1.86
47885--47958
35
2.1
35
84
0
94
37
1
18
41
1.59
63069--63166
31
3.2
31
80
14
105
50
1
1
47
1.14
63568--63621
23
2.4
23
81
3
65
50
1
5
42
1.36
70983--71058
32
2.4
32
88
0
116
15
10
34
39
1.82
79831--79879
21
2.4
21
93
3
82
16
4
20
59
1.53
80074--80238
58
2.8
58
79
5
154
30
15
6
47
1.70
86373--86430
24
2.5
24
78
13
66
31
0
13
55
1.39

Tables:   1

The End!