Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002919.1 Hibiscus syriacus cultivar Beakdansim tig00006035_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56340

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2030--2099
30
2.3
30
90
4
106
34
25
14
25
1.94
3899--3959
28
2.3
27
83
11
72
39
6
14
39
1.72
8656--8741
21
4.0
21
84
6
100
22
30
26
20
1.98
10076--10123
18
2.6
19
80
12
55
60
0
0
39
0.97
11656--11797
58
2.4
60
83
7
182
37
4
26
30
1.78
12868--12898
15
2.1
14
94
5
53
67
0
12
19
1.22
12872--12904
11
3.2
11
83
16
52
66
0
15
18
1.25
15593--15643
26
2.0
26
92
0
84
41
1
21
35
1.65
25829--25853
10
2.5
10
100
0
50
0
8
0
92
0.40
32952--32992
20
2.0
20
100
0
82
34
9
14
41
1.79
33551--33598
2
24.0
2
100
0
96
50
0
0
50
1.00
33884--33942
26
2.2
27
85
8
77
37
13
0
49
1.43
53166--53283
61
2.0
60
84
1
155
27
19
16
35
1.94

Tables:   1

The End!