Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002920.1 Hibiscus syriacus cultivar Beakdansim tig00006037_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72164

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1195--1730
251
2.2
245
83
12
683
27
11
18
41
1.85
2104--2150
18
2.7
18
86
3
69
27
29
8
34
1.87
14408--14438
2
15.5
2
100
0
62
51
0
0
48
1.00
19516--19550
3
11.7
3
88
11
54
68
0
31
0
0.90
19514--19547
11
3.2
11
83
8
52
70
0
29
0
0.87
19516--19552
14
2.7
14
91
4
58
70
0
29
0
0.88
25294--25338
13
3.6
12
79
8
54
22
26
0
51
1.49
29713--29747
17
2.0
18
88
5
54
20
5
11
62
1.48
32836--32881
18
2.6
18
82
0
56
47
0
15
36
1.45
33132--33183
2
26.5
2
94
3
88
46
0
1
51
1.12
45363--45407
16
2.9
16
86
3
56
66
0
24
8
1.20
53536--53815
92
3.0
92
100
0
560
35
13
9
40
1.78
57610--57676
28
2.3
30
79
5
75
56
0
1
41
1.08
59380--59422
16
2.7
15
76
16
50
51
0
0
48
1.00
59379--59419
17
2.5
17
80
11
50
51
0
0
48
1.00
59598--59643
2
23.0
2
100
0
92
50
0
0
50
1.00
59985--60150
64
2.7
60
88
4
233
28
31
12
26
1.93
66366--66419
27
2.0
27
85
7
74
25
33
14
25
1.95
69303--69340
17
2.2
17
100
0
76
36
15
0
47
1.46

Tables:   1

The End!