Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002924.1 Hibiscus syriacus cultivar Beakdansim tig00006043_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57526

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8986--9037
26
2.0
26
92
0
86
36
21
1
40
1.64
11717--11749
11
3.2
11
83
16
52
18
15
0
66
1.25
11723--11753
15
2.1
14
94
5
53
19
12
0
67
1.22
14500--14552
28
1.9
28
85
11
74
41
1
0
56
1.10
15874--16046
66
2.6
64
88
4
247
23
27
28
20
1.99
15876--16052
88
2.0
87
95
1
318
23
27
28
20
1.99
15873--16046
22
8.0
21
85
6
222
23
27
28
20
1.99
22163--22234
31
2.3
31
90
4
110
26
13
25
34
1.93
22382--22410
15
1.9
15
100
0
58
62
6
0
31
1.22
25335--25427
42
2.2
42
98
0
177
58
13
11
16
1.64
25355--25405
26
2.0
26
92
0
84
58
11
11
17
1.62
25293--25421
16
8.6
16
80
11
121
58
15
11
14
1.64
26517--26550
10
3.4
10
87
0
50
55
20
11
11
1.67
26829--26969
55
2.6
55
94
2
239
22
16
11
49
1.77
29602--29644
20
2.2
20
83
8
52
48
0
2
48
1.14
38828--38878
14
3.7
14
72
12
52
41
0
17
41
1.50
38813--38875
28
2.2
28
97
0
117
47
0
17
34
1.48
41346--41888
124
4.4
124
86
2
682
26
20
16
37
1.93
41892--42609
177
4.1
177
91
0
1114
29
20
16
32
1.95
42968--43076
54
2.0
54
94
0
191
24
25
11
37
1.90
43541--43743
52
3.9
52
85
0
255
23
23
16
36
1.94
45229--45317
18
4.7
19
81
10
103
0
19
0
80
0.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45239--45288
17
2.9
16
85
14
64
0
20
0
80
0.72
45238--45320
20
4.4
18
80
15
87
0
20
0
79
0.73
45229--45322
28
3.4
26
88
10
109
0
20
0
79
0.73
49035--49067
15
2.2
15
100
0
66
81
6
6
6
0.97
53220--53254
3
12.0
3
93
6
63
68
0
0
31
0.90
54038--54100
27
2.3
27
81
5
65
20
23
14
41
1.89

Tables:   1

The End!