Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002927.1 Hibiscus syriacus cultivar Beakdansim tig00006049_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75287

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2483--2511
7
4.1
7
100
0
58
41
31
0
27
1.56
4271--4336
28
2.3
29
82
5
82
21
3
4
71
1.18
4560--4682
29
4.1
29
81
6
140
55
0
4
40
1.19
4560--4682
59
2.1
60
84
4
160
55
0
4
40
1.19
4644--4747
27
3.6
27
73
21
102
52
0
0
45
1.13
4676--4783
36
3.2
36
72
22
135
50
1
1
45
1.23
4646--4786
63
2.2
63
100
0
282
51
1
1
46
1.18
4823--4852
2
15.0
2
100
0
60
50
0
0
50
1.00
5860--5889
3
10.0
3
100
0
60
33
0
0
66
0.92
21352--21402
24
2.2
23
82
10
59
50
11
11
25
1.72
22121--22149
14
2.0
15
93
6
51
13
44
0
41
1.44
25194--25238
22
2.0
22
83
8
56
44
11
6
37
1.66
39460--39516
21
2.7
21
91
0
96
45
22
14
17
1.84
40133--40181
20
2.5
20
89
0
71
18
18
26
36
1.94
40149--40204
20
2.8
20
91
0
85
10
16
23
50
1.76
41538--41586
18
2.7
18
96
0
89
28
44
12
14
1.81
41629--41704
33
2.3
34
86
2
100
47
17
19
15
1.83
41671--41708
20
1.9
20
88
0
58
55
15
15
13
1.70
42291--42345
22
2.6
21
88
8
76
23
30
16
29
1.96
43967--44025
20
3.0
20
89
0
91
45
25
20
8
1.79
44082--44150
20
3.5
20
87
0
93
26
21
20
31
1.98
44048--44192
74
2.0
74
84
2
193
24
19
20
36
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44155--44192
20
1.9
20
88
0
58
26
15
23
34
1.95
44363--44397
18
1.9
18
94
0
61
17
2
25
54
1.57
46645--46698
24
2.2
24
90
0
81
42
20
16
20
1.89
47352--47386
17
2.1
17
100
0
70
31
5
28
34
1.81
47536--47583
20
2.4
20
85
0
69
22
18
29
29
1.98
47809--47866
2
29.0
2
100
0
116
50
0
0
50
1.00
48033--48090
30
1.9
30
89
0
89
25
29
25
18
1.98
48108--48185
38
2.1
38
92
0
129
34
14
37
14
1.86
55350--55377
7
4.0
7
100
0
56
14
42
28
14
1.84
64832--64887
24
2.2
26
75
6
62
50
8
16
25
1.74
66412--66493
25
3.3
25
65
25
66
41
24
8
25
1.83
71945--71985
15
2.7
15
96
0
73
60
0
12
26
1.31
72548--72590
22
2.0
21
81
4
50
37
0
4
58
1.19
74188--74228
19
2.2
19
95
0
73
12
24
39
24
1.89
74859--74891
14
2.3
15
85
15
52
42
12
15
30
1.83

Tables:   1

The End!