Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002951.1 Hibiscus syriacus cultivar Beakdansim tig00006090_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70916

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5704--5768
22
3.0
21
69
8
67
24
7
3
64
1.34
5701--5849
44
3.5
44
79
7
128
24
10
4
61
1.45
5745--6056
43
7.4
42
69
15
112
26
15
5
52
1.65
7737--7878
36
4.0
36
94
0
241
18
22
24
34
1.96
13570--13617
24
2.0
24
87
0
69
18
52
20
8
1.71
22319--22359
22
1.9
21
90
5
64
68
2
0
29
1.03
28842--28876
2
17.5
2
100
0
70
48
0
0
51
1.00
30327--30360
13
2.7
12
86
13
50
58
0
29
11
1.33
52227--52265
19
2.1
19
85
4
53
51
0
0
48
1.00
52228--52272
23
2.0
22
82
4
54
53
2
0
44
1.13
53655--53680
2
13.0
2
100
0
52
50
0
0
50
1.00
57813--57923
46
2.4
47
92
3
188
31
22
23
22
1.98
60123--60225
30
3.3
30
76
7
107
59
13
5
21
1.55
60106--60231
63
2.0
63
92
0
207
56
14
7
22
1.62
61687--61715
12
2.4
12
100
0
58
6
44
31
17
1.75
67985--68050
34
1.9
34
93
0
114
42
12
6
39
1.67

Tables:   1

The End!