Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002958.1 Hibiscus syriacus cultivar Beakdansim tig00006114_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63926

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4553--4599
23
2.0
23
84
8
60
53
14
14
17
1.74
8010--8053
10
4.3
10
80
5
52
43
0
2
54
1.12
8012--8053
21
2.0
21
95
0
75
45
0
2
52
1.13
10162--10225
21
3.2
21
72
16
64
45
0
1
53
1.10
10170--10247
40
1.9
41
87
7
115
50
1
1
47
1.17
11231--11282
2
26.0
2
100
0
104
50
0
0
50
1.00
18293--18527
102
2.3
102
85
5
323
33
22
15
28
1.95
20692--20740
24
2.1
23
88
3
71
28
10
6
55
1.57
27737--27777
20
2.0
21
90
4
66
58
9
0
31
1.31
27734--27782
20
2.6
19
84
9
64
63
8
0
28
1.23
41512--41771
134
1.9
134
85
3
362
41
10
12
35
1.78
42852--42936
28
3.1
27
68
18
68
43
4
0
51
1.22
42932--43012
31
2.5
32
80
9
85
39
4
1
54
1.30
43114--43160
24
1.9
25
91
4
78
55
0
0
44
0.99
44596--44960
180
2.0
178
89
7
562
42
3
8
45
1.51
54365--54392
13
2.2
13
100
0
56
78
7
0
14
0.95
56102--56146
19
2.2
19
88
11
63
33
0
2
64
1.06
59453--59486
15
2.2
16
89
5
52
44
14
14
26
1.84

Tables:   1

The End!