Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002964.1 Hibiscus syriacus cultivar Beakdansim tig00006132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57180

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5722--5770
25
2.0
25
87
0
71
42
4
2
51
1.32
7736--7798
26
2.4
27
92
7
103
31
4
0
63
1.15
14646--14689
23
1.9
23
90
0
70
18
20
20
40
1.91
18785--18836
25
2.1
25
100
0
104
51
21
0
26
1.47
28092--28185
42
2.2
42
92
0
152
18
25
31
24
1.97
29474--29517
14
2.9
16
76
13
56
50
6
6
36
1.56
30398--30430
15
2.2
15
94
0
57
6
15
69
9
1.34
30640--30856
52
4.2
51
66
21
121
38
1
8
51
1.43
32896--32920
6
4.2
6
100
0
50
48
0
0
52
1.00
33919--34017
42
2.3
42
96
1
180
32
22
18
27
1.97
36830--36947
38
3.2
38
62
22
95
44
11
19
24
1.83
36803--36950
74
2.0
74
100
0
296
43
13
18
24
1.86
45499--45566
31
2.2
31
81
7
75
32
7
8
51
1.61
45715--45744
15
2.0
15
93
0
51
60
3
0
36
1.14
47502--47553
20
2.6
20
93
0
95
23
19
17
40
1.91
47541--47615
21
3.6
21
70
13
64
21
18
24
36
1.95
50324--50349
3
8.7
3
100
0
52
0
34
0
65
0.93
55350--55389
21
1.9
22
85
10
57
45
5
12
37
1.64
55488--55643
78
2.0
78
85
6
208
33
15
14
36
1.87

Tables:   1

The End!