Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002966.1 Hibiscus syriacus cultivar Beakdansim tig00006135_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74684

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--780
23
2.0
23
86
4
65
39
21
13
26
1.90
1449--1697
20
12.5
20
85
2
259
20
17
24
37
1.94
1454--1658
79
2.6
79
86
6
272
22
18
24
35
1.96
2237--2287
25
2.0
25
100
0
102
52
15
11
19
1.73
5521--5545
2
12.5
2
100
0
50
48
0
0
52
1.00
5849--6027
60
3.0
59
76
8
159
31
21
6
40
1.78
6152--6275
60
2.1
60
83
6
153
37
4
28
30
1.76
20015--20083
34
2.0
34
97
0
129
39
23
18
18
1.93
26055--26228
85
2.0
85
92
0
285
26
26
22
24
2.00
31117--31155
19
2.1
19
90
4
62
46
0
12
41
1.42
47325--47364
2
20.5
2
94
5
73
0
50
0
50
1.00
54024--54083
6
10.0
6
100
0
120
16
50
16
16
1.79
74013--74347
167
2.0
168
93
2
577
36
18
16
28
1.93

Tables:   1

The End!