Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002967.1 Hibiscus syriacus cultivar Beakdansim tig00006136_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82049

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81--136
24
2.3
24
96
0
103
17
25
28
28
1.98
2597--2655
2
30.0
2
89
3
93
49
1
1
47
1.21
2713--2747
16
2.2
16
89
0
52
80
2
11
5
1.00
4159--4185
10
2.7
10
100
0
54
7
29
40
22
1.81
15073--15151
2
39.5
2
100
0
158
49
0
0
50
1.00
29938--29971
2
17.5
2
93
6
61
50
0
50
0
1.00
33330--33359
11
2.7
11
94
0
51
20
53
10
16
1.71
42243--42290
24
2.0
24
100
0
96
50
12
8
29
1.69
42981--43125
60
2.4
60
86
3
184
40
4
20
35
1.72
46064--46118
23
2.3
23
84
9
67
49
0
1
49
1.11
46080--46134
23
2.4
23
79
11
60
49
0
3
47
1.19
49207--49247
18
2.3
18
91
4
66
63
2
4
29
1.28
57886--57910
3
8.3
3
100
0
50
68
0
0
32
0.90
58461--58505
23
2.0
23
86
0
63
60
13
11
15
1.60
58821--58853
11
3.1
11
86
8
50
60
0
0
39
0.97
65789--65869
28
2.9
27
72
7
63
49
1
1
48
1.17
66097--66250
78
2.0
77
87
1
218
29
17
20
33
1.95
69492--69537
2
23.0
2
100
0
92
50
0
0
50
1.00
70505--70539
3
11.7
3
88
11
54
68
0
31
0
0.90
75310--75338
2
14.5
2
100
0
58
51
0
0
48
1.00
79080--79104
12
2.1
12
100
0
50
64
16
0
20
1.30

Tables:   1

The End!