Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002969.1 Hibiscus syriacus cultivar Beakdansim tig00006144_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66554

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5413--5450
20
1.9
20
94
0
67
26
28
5
39
1.78
6731--6850
20
5.6
20
72
14
87
56
13
15
15
1.67
6721--6844
24
5.5
24
72
14
102
57
13
14
14
1.66
6738--6854
44
2.7
44
97
0
216
56
11
14
17
1.67
8343--8943
151
4.0
151
97
1
1156
46
16
11
25
1.81
8343--8943
298
2.0
301
98
1
1163
46
16
11
25
1.81
25530--25589
23
2.6
23
89
2
84
46
10
13
30
1.75
25583--25688
30
3.5
30
73
5
106
56
16
7
19
1.63
25848--25883
15
2.4
15
90
9
56
33
0
0
66
0.92
29026--29051
2
13.0
2
100
0
52
50
0
0
50
1.00
38473--38512
21
1.9
21
84
0
53
22
0
7
70
1.12
43898--43941
22
2.1
20
83
8
52
43
4
4
47
1.44
47648--47775
66
1.9
66
96
0
238
43
9
9
37
1.69
47931--47967
2
18.5
2
100
0
74
48
0
0
51
1.00
57219--57275
19
2.8
20
92
7
98
57
15
10
15
1.64
61726--61803
40
2.0
40
82
9
99
51
2
1
44
1.23
62277--62301
11
2.3
11
100
0
50
0
8
40
52
1.31

Tables:   1

The End!