Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002971.1 Hibiscus syriacus cultivar Beakdansim tig00006146_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54638

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1509--1561
5
10.6
5
93
0
52
32
0
67
0
0.91
1518--1562
5
9.0
5
97
0
63
33
0
66
0
0.92
8497--8525
2
14.5
2
100
0
58
51
0
48
0
1.00
22872--23019
71
2.0
75
84
11
200
44
8
8
37
1.67
24661--24695
16
2.3
15
90
9
54
60
5
0
34
1.21
28197--28240
23
2.0
22
86
4
61
11
18
0
70
1.16
32009--32051
14
3.1
14
86
0
59
11
18
16
53
1.72
32268--32328
23
2.7
23
84
0
86
18
9
14
57
1.64
32263--32342
10
7.4
10
69
15
52
18
11
12
57
1.64
39023--39055
16
2.1
16
100
0
66
27
6
18
48
1.71
39200--39254
13
4.3
13
78
17
62
65
1
0
32
1.03
39190--39261
26
2.8
25
83
10
83
65
1
0
33
1.02
39799--39876
29
2.7
29
81
2
93
42
8
10
38
1.70
42529--42685
78
2.0
78
86
5
217
36
14
15
33
1.87
50548--50622
21
3.6
21
70
13
64
36
24
18
21
1.95
50610--50661
20
2.6
20
93
0
95
40
17
19
23
1.91

Tables:   1

The End!