Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002973.1 Hibiscus syriacus cultivar Beakdansim tig00006149_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57451

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5963--6000
20
1.9
20
88
0
58
26
26
5
42
1.76
6364--6419
28
2.0
28
96
0
103
41
17
5
35
1.73
6880--6909
15
2.0
15
100
0
60
13
33
13
40
1.83
12643--12696
16
3.4
16
82
7
65
68
0
0
31
0.90
13682--13723
14
3.0
14
93
6
68
35
14
21
28
1.92
15409--15460
2
26.0
2
100
0
104
50
0
0
50
1.00
23367--23469
40
2.6
40
82
0
134
43
7
14
33
1.74
28391--28767
200
1.9
201
88
3
569
25
33
14
26
1.94
35107--35151
21
2.1
21
83
0
54
33
6
6
53
1.53
40473--40519
21
2.3
20
85
3
67
44
0
0
55
0.99
46755--46803
25
2.0
25
87
0
71
42
4
2
51
1.32
48763--48826
27
2.4
28
92
5
105
32
4
0
62
1.16
55597--55640
23
1.9
23
90
0
70
18
20
20
40
1.91

Tables:   1

The End!