Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002975.1 Hibiscus syriacus cultivar Beakdansim tig00006154_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71579

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6183--6227
23
2.0
23
95
0
81
20
31
11
37
1.87
11960--12034
36
2.1
36
85
2
98
44
21
0
34
1.53
14857--14882
2
13.0
2
100
0
52
50
0
0
50
1.00
21959--22476
41
12.6
40
79
7
436
29
19
17
33
1.95
21959--22476
82
6.3
82
77
7
480
29
19
17
33
1.95
21999--22476
166
2.9
164
87
3
705
29
19
17
33
1.95
25779--26043
43
6.1
43
82
5
250
23
21
20
35
1.96
25787--26023
86
2.7
85
84
4
289
24
21
20
33
1.97
35409--35438
13
2.3
13
94
0
51
53
3
0
43
1.17
36745--36789
21
2.1
21
84
8
56
31
26
24
17
1.97
38378--38598
103
2.1
103
93
1
372
27
13
23
36
1.92
38607--38669
23
2.7
23
87
0
90
19
26
26
26
1.99
42254--42298
21
2.1
21
83
0
54
31
31
24
13
1.93
47571--47619
22
2.2
22
82
7
64
32
30
28
8
1.86
48436--48471
18
2.0
18
94
0
63
13
22
30
33
1.93
48313--48575
121
2.2
121
94
2
458
25
15
23
35
1.94
48348--48532
59
3.1
59
64
26
152
26
16
22
34
1.95
48573--48650
23
3.3
23
83
1
102
24
19
23
33
1.97
49702--49746
21
2.1
21
84
8
56
31
26
24
17
1.97
51338--51541
103
2.0
103
97
0
381
26
13
22
36
1.92
51565--51627
23
2.7
23
90
0
90
22
26
25
25
2.00
54656--54697
20
2.0
21
90
4
68
66
2
0
30
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54852--54907
27
2.1
26
86
3
76
35
28
8
26
1.87
60424--60457
17
2.0
17
88
0
50
41
0
2
55
1.15
61136--61169
13
2.7
12
86
13
50
47
14
0
38
1.45
63108--63214
52
2.1
49
86
6
151
36
5
16
41
1.72
64538--64604
33
2.0
33
100
0
134
11
11
26
49
1.74
68631--68723
45
2.1
45
97
0
177
33
15
24
26
1.95
70037--70065
13
2.2
13
100
0
58
6
62
31
0
1.22
70333--70364
16
2.0
16
93
0
55
0
6
15
78
0.95
70758--70862
3
34.7
3
81
9
115
62
0
0
36
1.02
70756--70862
39
2.8
39
87
4
137
62
0
0
36
1.02
70757--70863
33
3.0
36
82
13
134
63
0
0
35
1.01
70990--71576
223
2.7
223
94
4
1027
35
22
21
20
1.96
70990--71579
74
8.0
76
93
5
1029
35
22
21
20
1.96

Tables:   1

The End!