Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002976.1 Hibiscus syriacus cultivar Beakdansim tig00006155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73464

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8196--8233
20
1.9
20
84
10
51
50
2
0
47
1.15
16987--17020
2
17.0
2
100
0
68
50
0
0
50
1.00
17473--17553
38
2.2
36
82
4
90
54
2
1
41
1.21
18864--18973
51
2.2
50
83
1
130
32
6
10
50
1.63
19652--19701
18
2.6
19
81
9
57
72
4
0
24
1.02
19651--19710
17
3.5
17
77
8
50
68
3
0
28
1.05
24268--24293
6
4.3
6
100
0
52
46
0
0
53
1.00
29330--29486
64
2.5
63
80
9
174
33
19
23
23
1.97
30387--30424
2
19.0
2
100
0
76
50
0
0
50
1.00
30804--30866
23
2.7
23
85
0
90
17
26
25
30
1.97
38251--38396
77
1.9
78
83
7
190
39
12
7
41
1.71
43116--43178
22
3.0
21
84
9
83
52
0
1
46
1.10
43123--43178
21
2.7
20
86
8
76
55
0
0
44
0.99
46600--46702
36
2.9
36
88
0
161
29
15
12
42
1.84
54386--54427
18
2.3
18
100
0
84
35
14
11
38
1.83
55680--55736
27
2.1
27
100
0
114
24
26
14
35
1.93
70929--70998
34
2.1
34
88
0
104
55
10
5
28
1.55

Tables:   1

The End!