Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002977.1 Hibiscus syriacus cultivar Beakdansim tig00006156_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85176

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15312--16692
687
2.0
688
99
0
2728
40
14
15
29
1.87
16854--17151
157
1.9
163
85
5
419
45
13
13
27
1.81
17493--17745
126
2.0
124
97
1
479
37
29
9
23
1.86
21394--21493
47
2.1
47
94
0
173
35
12
8
45
1.71
24217--24856
317
2.0
318
98
0
1237
38
15
14
31
1.87
25387--27834
812
3.0
815
96
0
4523
35
16
20
27
1.94
29167--29387
21
10.6
21
81
4
250
53
3
3
39
1.34
29166--29387
62
3.5
63
81
2
268
53
3
3
39
1.34
29167--29386
83
2.6
83
91
0
332
53
3
3
40
1.35
31350--31396
21
2.2
21
96
0
85
38
12
23
25
1.90
38436--38595
82
2.0
82
92
0
266
28
13
8
49
1.72
38583--38617
18
1.9
18
88
0
52
51
0
20
28
1.47
57531--57572
18
2.3
18
87
4
57
57
0
2
40
1.12
63500--63574
35
2.1
35
90
4
116
44
22
0
33
1.53
63570--63647
35
2.2
35
84
6
104
41
0
17
41
1.50
73099--73136
16
2.5
15
80
12
51
63
15
7
13
1.51
73203--73242
14
2.9
14
81
3
55
60
22
10
7
1.54
74042--74074
13
2.4
14
85
10
50
54
0
0
45
0.99
75221--75289
11
6.2
11
70
9
50
50
4
1
43
1.30
75435--75477
18
2.4
18
92
0
77
27
4
20
46
1.71
78027--78053
4
6.8
4
100
0
54
25
0
25
48
1.52
79113--79165
6
8.8
6
100
0
106
50
0
49
0
1.00

Tables:   1

The End!