Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002982.1 Hibiscus syriacus cultivar Beakdansim tig00006171_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51838

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--498
11
2.8
11
95
5
53
46
6
0
46
1.29
583--629
18
2.5
20
86
13
64
74
0
2
23
0.93
1050--1086
18
2.1
18
90
10
58
72
2
2
21
1.09
5483--5534
28
1.9
26
84
7
68
50
3
11
34
1.57
9044--9084
16
2.6
16
88
3
57
36
9
19
34
1.85
10771--10846
37
2.0
38
92
2
127
51
5
7
35
1.54
13161--13215
27
2.0
28
92
3
94
14
9
7
69
1.36
18400--18436
15
2.5
15
100
0
74
24
24
0
51
1.49
19362--19397
4
9.0
4
100
0
72
25
0
25
50
1.50
23233--23346
56
2.0
57
94
1
203
35
6
23
35
1.80
29597--29638
2
21.0
2
100
0
84
50
0
50
0
1.00
31628--31786
60
2.7
60
90
0
237
32
20
12
34
1.90
41350--41455
51
2.1
51
98
0
203
18
13
20
47
1.82
43743--43787
22
2.0
22
91
0
72
28
20
15
35
1.93

Tables:   1

The End!