Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002987.1 Hibiscus syriacus cultivar Beakdansim tig00006176_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63642

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3937--3965
14
2.1
14
100
0
58
86
0
13
0
0.58
7076--7111
18
2.0
18
88
0
54
66
5
2
25
1.27
11971--11999
2
14.5
2
100
0
58
0
48
0
51
1.00
12017--12247
120
1.9
120
88
0
345
41
14
15
28
1.87
17411--17450
21
1.9
21
84
0
53
35
12
2
50
1.54
18091--18124
13
2.5
14
90
4
52
23
0
29
47
1.52
41034--41092
31
1.9
31
83
13
77
33
13
20
32
1.91
44131--44198
23
3.0
23
86
0
100
17
26
26
29
1.98
46841--46880
17
2.4
17
87
4
55
32
0
22
45
1.53
49221--49286
23
2.9
23
79
0
78
19
25
22
31
1.98
51427--51467
21
1.9
21
85
5
55
34
2
26
36
1.70
51918--51957
17
2.4
17
87
4
55
32
0
22
45
1.53
54321--54386
23
2.9
23
83
0
87
19
27
22
30
1.98

Tables:   1

The End!