Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002989.1 Hibiscus syriacus cultivar Beakdansim tig00006178_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56375

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2480--2696
32
6.8
32
85
3
260
35
16
17
30
1.92
2480--2696
64
3.4
64
85
3
287
35
16
17
30
1.92
2478--2696
96
2.3
95
85
1
296
34
16
17
31
1.93
3199--3223
2
12.5
2
100
0
50
48
0
0
52
1.00
7322--7424
32
3.3
32
94
2
174
29
19
20
31
1.97
9725--9779
3
18.7
3
81
10
69
63
1
1
32
1.15
10008--10595
133
4.4
134
87
1
770
34
19
17
29
1.95
9990--10595
267
2.3
266
85
1
793
33
19
17
29
1.95
28270--28394
31
4.0
31
94
2
207
37
23
19
20
1.94
34090--34141
24
2.2
24
82
6
61
44
19
9
26
1.81
34101--34222
24
5.1
23
79
10
129
40
18
13
27
1.89
34107--34222
48
2.4
49
85
8
150
39
18
14
26
1.90
34101--34240
72
2.0
71
83
9
178
41
18
13
26
1.88
35242--35277
18
2.0
18
88
0
54
30
16
0
52
1.44
36605--36645
18
2.3
18
91
0
64
14
21
46
17
1.84
36597--36625
13
2.2
13
100
0
58
20
24
37
17
1.93
39802--39869
32
2.2
32
84
12
88
54
2
2
39
1.31
39995--40043
16
3.1
16
87
0
62
53
4
2
40
1.32
46249--46310
32
1.9
32
90
0
97
54
3
17
24
1.57
46250--46322
32
2.3
32
83
6
87
57
4
16
21
1.56

Tables:   1

The End!