Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002994.1 Hibiscus syriacus cultivar Beakdansim tig00006190_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83010

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24285--24341
24
2.4
23
88
2
78
47
21
14
17
1.82
24285--24359
23
3.2
23
84
1
87
45
20
14
20
1.85
24717--24750
17
2.0
17
88
0
50
73
2
0
23
0.97
25374--25419
19
2.5
19
80
16
53
56
17
0
26
1.41
25411--25506
32
2.8
32
74
13
86
61
10
3
25
1.43
27132--27235
29
3.4
30
66
14
77
22
22
12
43
1.86
27335--27421
5
16.8
5
73
9
59
71
1
4
22
1.11
27334--27422
11
8.5
11
71
9
62
71
1
4
22
1.10
27388--27435
22
2.2
21
85
3
60
70
2
10
16
1.24
29514--29543
4
7.2
4
92
7
51
73
0
0
26
0.84
29510--29543
17
2.0
17
94
0
59
73
0
0
26
0.83
30141--30333
76
2.6
75
78
11
202
56
11
2
29
1.48
37611--37659
24
2.0
25
84
4
64
36
0
0
63
0.95
37608--37663
29
2.0
27
83
10
69
37
0
0
62
0.95
41671--41736
33
1.9
34
85
11
91
48
18
12
21
1.80
50385--50417
17
1.9
18
88
11
52
42
3
0
54
1.15
52735--52782
21
2.3
21
92
0
78
22
18
29
29
1.98
52746--52817
12
6.5
12
66
18
57
23
23
26
26
2.00
59479--59520
21
2.0
21
86
9
59
66
2
0
30
1.04
59558--59584
13
2.1
13
100
0
54
51
0
22
25
1.48
63934--63984
21
2.4
23
81
15
65
27
0
3
68
1.07
64040--64096
26
2.2
26
93
0
96
36
28
17
17
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64257--64327
36
1.9
37
97
2
135
19
21
12
46
1.83
65581--65647
33
2.2
30
87
12
93
26
7
11
53
1.64
70803--70914
42
2.7
42
92
0
188
21
16
14
48
1.81
71051--71142
24
3.8
23
71
22
73
50
2
0
47
1.13
71113--71280
29
6.0
28
68
25
90
47
0
1
50
1.16
71096--71280
28
6.9
26
67
24
68
47
0
1
50
1.15
71104--71164
22
2.8
23
82
7
65
47
0
0
52
1.00
71115--71193
31
2.5
32
80
16
92
48
1
0
50
1.08
71215--71288
19
3.9
19
70
14
55
48
0
2
48
1.15
71283--71327
23
2.0
23
86
0
63
53
2
2
42
1.25
71296--71465
90
1.9
86
81
9
200
50
4
0
45
1.23

Tables:   1

The End!