Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002996.1 Hibiscus syriacus cultivar Beakdansim tig00006197_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55964

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2782--2821
21
1.9
21
85
10
55
35
10
2
52
1.48
8939--9111
90
1.9
89
92
1
292
44
5
9
39
1.62
9495--9534
20
1.9
21
85
10
55
37
37
10
15
1.80
11345--11377
16
2.1
16
100
0
66
45
12
0
42
1.41
16201--16268
25
2.7
25
88
0
109
33
11
1
52
1.47
19127--19159
12
2.8
12
100
0
66
27
9
33
30
1.88
22763--22801
6
6.5
6
100
0
78
33
48
0
17
1.48
31810--31842
16
2.0
17
88
5
50
36
6
24
33
1.80
32715--32745
16
1.9
16
93
0
53
51
6
0
41
1.27
33227--33255
14
2.1
14
93
6
51
13
20
44
20
1.85
37481--37548
35
1.9
35
90
0
109
41
22
2
33
1.69
37554--37611
27
2.1
27
100
0
116
39
0
17
43
1.49
37581--37654
35
2.1
35
92
0
121
35
0
20
44
1.52
46670--46707
20
2.0
20
89
5
60
15
10
7
65
1.45

Tables:   1

The End!