Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000300.1 Hibiscus syriacus cultivar Beakdansim tig00000551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67279

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15302--15341
21
1.9
21
84
0
53
17
25
27
30
1.97
16616--16665
23
2.2
23
100
0
100
12
22
20
46
1.83
17763--17808
12
3.6
12
81
16
56
45
17
19
17
1.85
17769--17809
12
3.1
13
80
19
57
46
14
17
21
1.84
20096--20135
21
1.9
21
94
0
71
30
15
7
47
1.72
20130--20228
33
3.0
33
94
1
164
32
7
15
45
1.73
20214--20268
13
4.2
13
75
13
58
34
3
12
49
1.59
20683--20716
17
1.9
18
94
5
61
38
11
8
41
1.73
20666--20716
15
3.2
16
76
15
52
35
9
9
45
1.71
20810--20841
16
2.0
17
88
11
50
43
21
21
12
1.86
42745--42775
16
2.0
16
93
6
55
64
0
0
35
0.94
44024--44062
19
2.1
18
90
4
60
51
5
0
43
1.24
45315--45350
10
3.7
10
85
7
56
77
0
22
0
0.76
52014--52051
20
1.9
20
88
0
58
26
34
26
13
1.93
56060--56089
16
1.9
15
93
6
51
13
26
40
20
1.89
56249--56289
18
2.3
18
86
0
55
73
0
4
21
1.02
56265--56315
14
3.5
14
80
17
59
68
0
0
31
0.90
56258--56299
22
1.9
22
85
9
59
71
0
2
26
0.98
56279--56336
18
3.2
18
80
2
71
65
1
0
32
1.03
56408--56728
36
9.2
36
71
14
187
44
5
1
47
1.37
56499--56536
2
19.5
2
94
5
69
47
0
0
52
1.00
56463--56572
56
2.0
53
91
5
175
45
3
1
49
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56428--56608
94
1.9
91
86
6
256
43
4
2
49
1.34
56518--56728
74
2.8
74
88
3
318
45
6
2
46
1.41
56602--56654
27
2.0
27
81
7
63
43
7
0
49
1.31
56516--56728
38
5.7
37
85
8
297
45
6
2
46
1.41
57535--57602
31
2.2
31
83
0
91
42
14
4
38
1.66
58398--58471
10
7.6
10
67
27
52
56
20
10
12
1.65
58401--58465
16
4.1
16
87
0
94
56
21
10
10
1.63
59544--59575
14
2.3
14
100
0
64
59
15
12
12
1.61
59627--59728
40
2.5
40
98
0
195
30
16
11
41
1.84
59924--59951
14
2.0
14
100
0
56
35
14
7
42
1.73
60203--60298
48
2.0
48
97
0
183
46
6
15
31
1.71
61893--61953
31
1.9
32
93
3
106
39
19
0
40
1.52
65041--65074
16
2.1
16
88
0
50
44
8
0
47
1.34

Tables:   1

The End!