Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003012.1 Hibiscus syriacus cultivar Beakdansim tig00006240_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58326

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14411--14440
12
2.5
12
100
0
60
26
16
33
23
1.96
18096--18184
39
2.3
39
82
0
97
25
23
16
33
1.96
18168--18381
105
2.0
105
90
0
338
22
23
23
29
1.99
24908--24944
19
1.9
19
100
0
74
37
32
13
16
1.87
28780--28863
23
3.7
23
91
0
132
27
26
27
19
1.99
29837--29879
21
2.0
21
91
8
70
32
18
25
23
1.97
34042--34102
23
2.7
23
92
0
104
24
27
27
19
1.99
38284--38315
2
16.0
2
100
0
64
50
0
0
50
1.00
42869--42902
2
17.0
2
100
0
68
50
0
0
50
1.00
43197--43232
12
3.0
12
100
0
72
16
33
41
8
1.78
49811--49878
24
2.9
23
73
16
68
14
10
2
72
1.23
51541--51567
13
2.1
13
100
0
54
44
0
14
40
1.46
52764--52845
42
2.0
42
92
4
139
41
10
12
35
1.78
55416--55468
20
2.5
22
79
14
67
62
1
35
0
1.06
55459--55493
2
17.5
2
100
0
70
51
0
48
0
1.00

Tables:   1

The End!