Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003026.1 Hibiscus syriacus cultivar Beakdansim tig00006296_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64969

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5612--5666
2
27.5
2
96
0
101
50
1
0
47
1.11
14533--14579
24
2.0
24
91
0
76
63
6
25
4
1.36
16492--16534
20
2.1
19
83
12
50
51
0
0
48
1.00
17156--17281
5
25.2
5
95
0
216
39
23
0
36
1.55
18757--18881
23
5.3
23
78
2
133
30
23
22
24
1.99
18762--18881
47
2.6
47
95
1
215
30
23
23
23
1.99
18888--19105
103
2.1
103
95
0
400
36
23
13
26
1.92
24093--24125
17
1.9
17
88
11
50
45
3
12
39
1.57
25964--26067
51
2.0
51
83
3
129
20
31
31
16
1.94
26391--26435
21
2.3
20
82
14
58
35
6
0
57
1.25
26649--26736
2
44.0
2
100
0
176
50
0
0
50
1.00
31122--31165
19
2.5
17
85
10
54
34
4
4
56
1.40
31530--31581
24
2.2
24
92
0
86
38
15
3
42
1.65
31672--31730
6
11.0
5
89
7
57
38
0
0
61
0.96
31672--31718
6
8.2
6
93
6
80
34
0
0
65
0.93
38442--38471
11
2.6
11
94
5
51
70
0
0
30
0.88
45141--45174
16
2.2
16
89
5
52
61
2
2
32
1.26
46530--46555
6
4.3
6
100
0
52
30
53
0
15
1.42
50507--50749
70
3.4
70
79
7
251
39
6
6
48
1.53
50562--50752
35
5.4
36
70
14
121
39
6
6
47
1.55
55103--55140
17
2.3
17
86
4
51
52
26
2
18
1.58
55405--55443
18
2.2
18
85
0
51
7
25
30
35
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57020--57079
21
2.7
23
75
12
72
20
26
28
25
1.99

Tables:   1

The End!