Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003029.1 Hibiscus syriacus cultivar Beakdansim tig00006306_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32317

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2182--2245
30
2.1
30
85
5
85
35
25
29
9
1.87
3458--3490
2
16.5
2
100
0
66
48
0
0
51
1.00
8569--8621
2
27.0
2
96
3
99
49
0
0
50
1.00
8692--8971
102
2.8
99
80
12
306
46
3
5
45
1.42
8824--8946
63
1.9
66
86
5
180
47
4
4
44
1.41
8822--8923
29
3.3
29
78
6
96
49
4
4
41
1.46
8607--8926
134
2.3
138
77
12
320
47
4
5
42
1.47
8921--8958
15
2.5
15
86
0
58
50
0
0
50
1.00
8995--9041
4
12.0
4
95
4
87
25
0
0
74
0.82
10202--10269
20
3.2
20
80
17
68
25
5
0
69
1.11
10191--10269
36
2.3
33
81
14
88
24
5
0
70
1.06
10310--10365
14
3.7
15
78
21
64
19
3
3
73
1.13
14195--14469
84
3.3
84
89
1
417
30
24
20
25
1.98
14403--14537
67
2.0
68
91
1
218
30
22
21
25
1.99
14469--15189
84
8.6
84
88
1
1061
30
25
20
24
1.99
15906--16068
65
2.5
64
85
2
227
27
15
26
30
1.96
16020--16066
19
2.5
19
83
10
62
25
17
31
25
1.97
16284--16323
20
2.0
21
85
14
57
45
7
5
42
1.54
24424--24549
64
2.0
64
88
0
189
27
16
24
30
1.97
24906--25507
84
7.3
83
77
8
448
31
23
18
26
1.98
24867--25505
246
2.6
245
81
5
740
31
23
18
26
1.97
26020--26082
2
34.0
2
75
15
64
46
3
0
50
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26020--26078
23
2.7
22
82
14
70
45
3
0
50
1.18
26106--26196
38
2.5
37
84
8
116
45
3
7
43
1.49
26067--26245
73
2.5
71
81
7
204
44
3
5
46
1.43
26151--26425
96
2.9
95
77
15
287
44
3
4
47
1.40
26068--26252
35
5.1
37
75
12
172
44
3
5
47
1.42
26222--26282
28
2.3
25
81
10
68
47
4
3
44
1.41
26072--26392
34
9.6
34
70
16
140
45
4
4
45
1.44
26282--26412
63
2.1
63
82
4
158
45
3
3
47
1.39
26314--26380
29
2.4
28
82
2
80
47
4
4
43
1.43
27644--27693
12
4.1
12
78
12
57
26
4
2
68
1.18
27731--27814
8
10.6
8
75
15
77
23
3
0
72
1.00
27725--27820
24
4.5
21
75
20
83
23
4
0
71
1.03
27718--27793
25
3.1
24
81
14
86
22
3
1
72
1.09
27738--27820
28
3.0
28
73
20
86
24
2
0
73
0.95
29272--29303
16
2.1
16
88
11
50
28
9
9
53
1.64

Tables:   1

The End!