Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003038.1 Hibiscus syriacus cultivar Beakdansim tig00006319_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82249

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--389
15
2.5
17
88
8
57
50
0
0
50
1.00
9590--9663
3
25.7
3
89
8
109
36
0
0
63
0.95
11032--11102
30
2.3
32
78
11
85
32
1
4
61
1.23
11091--11138
24
1.9
25
87
8
71
27
2
8
62
1.35
11347--11394
21
2.3
21
82
10
55
37
2
2
58
1.22
12043--12096
28
2.0
27
85
3
72
33
7
0
59
1.25
12065--12119
24
2.5
22
80
11
58
27
3
1
67
1.17
16979--17020
13
2.9
14
83
16
59
78
0
21
0
0.75
16979--17021
8
5.8
8
89
10
65
79
0
20
0
0.74
17016--17053
8
4.9
8
93
6
69
89
0
0
10
0.49
16993--17045
16
3.3
16
89
0
70
83
0
11
5
0.81
17016--17053
15
2.4
16
95
4
69
89
0
0
10
0.49
20346--20524
75
2.4
75
78
0
196
31
16
20
30
1.95
22127--22714
123
5.1
112
80
9
391
37
15
18
29
1.91
22372--22715
123
2.9
120
87
4
464
37
15
17
28
1.91
23050--23127
3
27.0
3
88
7
99
37
1
0
61
1.04
24498--24568
30
2.3
32
78
11
85
32
1
4
61
1.23
24557--24604
24
1.9
25
87
8
71
27
2
8
62
1.35
24581--24631
14
3.6
14
80
12
52
31
0
1
66
1.03
34309--34352
2
22.0
2
95
0
79
50
0
2
47
1.13
36320--36350
16
1.9
16
100
0
62
51
19
9
19
1.74
37399--37451
22
2.7
18
74
20
61
33
1
0
64
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37400--37445
22
2.1
22
91
0
74
34
2
0
63
1.07
38830--38863
17
1.9
17
88
5
50
32
5
0
61
1.20
39026--39073
19
2.5
19
77
12
53
18
6
0
75
1.01
39031--39073
18
2.3
18
80
19
52
18
4
0
76
0.95
39046--39075
11
2.8
11
95
5
53
20
0
0
80
0.72
38943--39207
141
1.9
144
95
3
482
25
8
4
61
1.44
40348--40376
10
2.9
10
100
0
58
20
0
0
79
0.74
50126--51004
105
8.4
105
96
1
1557
33
26
17
22
1.96
52586--52619
17
1.9
17
88
5
50
32
5
0
61
1.20
52608--52681
38
2.0
37
82
17
91
31
4
1
63
1.21
52774--52821
19
2.5
19
77
12
53
18
6
0
75
1.01
52779--52821
18
2.3
18
80
19
52
18
4
0
76
0.95
52794--52823
11
2.8
11
95
5
53
20
0
0
80
0.72
52689--52957
143
1.9
146
95
3
490
25
8
4
61
1.43
60169--60236
27
2.5
27
97
0
127
54
2
11
30
1.51
60169--60236
9
7.6
9
74
12
59
54
2
11
30
1.51
62780--62805
2
13.0
2
100
0
52
50
0
0
50
1.00
77712--77736
9
2.8
9
100
0
50
40
0
0
60
0.97
79129--79183
27
2.0
27
100
0
110
49
14
29
7
1.70
81213--81250
20
1.9
20
89
10
60
71
5
0
23
1.07

Tables:   1

The End!