Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003041.1 Hibiscus syriacus cultivar Beakdansim tig00006325_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42429

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
905--935
16
1.9
16
100
0
62
51
19
9
19
1.74
12835--12899
28
2.3
27
87
7
94
43
29
9
18
1.81
12865--12936
38
1.9
38
91
2
119
40
30
11
18
1.85
14554--14618
30
2.2
30
100
0
130
30
12
40
16
1.86
14554--14633
30
2.7
30
92
0
115
27
13
41
17
1.87
17470--17910
158
2.7
164
81
11
514
27
17
7
48
1.73
21309--21354
24
1.9
24
95
0
83
45
10
23
19
1.82
36035--36101
3
23.7
3
81
17
72
38
0
0
61
0.96
36034--36101
11
6.1
12
77
19
60
39
0
0
60
0.97
37446--37517
30
2.4
31
79
13
87
31
1
4
62
1.23
37504--37551
24
1.9
25
87
8
71
27
2
8
62
1.35
38443--38496
28
2.0
27
85
3
72
33
7
0
59
1.25
38465--38519
24
2.5
22
80
11
58
27
3
1
67
1.17

Tables:   1

The End!