Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003046.1 Hibiscus syriacus cultivar Beakdansim tig00006339_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50152

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--159
15
2.1
15
94
0
55
21
6
12
59
1.55
17714--17804
39
2.3
39
90
0
137
32
8
13
45
1.74
21899--21957
19
3.1
19
71
11
57
66
0
8
25
1.20
25894--25952
19
3.1
19
78
11
66
72
0
5
22
1.03
25901--25952
19
2.7
20
87
6
79
75
0
3
21
0.97
25901--25959
13
4.5
13
76
16
50
74
1
3
20
1.05
25901--25964
20
3.3
19
79
16
69
73
1
3
21
1.06
26007--26044
17
2.2
18
90
4
60
71
0
2
26
1.00
32847--32929
29
2.8
29
94
1
148
40
13
14
31
1.84
37548--37620
29
2.5
29
88
0
119
42
15
13
28
1.85
39850--39896
13
3.3
15
77
17
55
46
0
4
48
1.21
40217--40290
6
12.3
6
100
0
148
33
0
0
66
0.92
40399--40430
2
16.0
2
100
0
64
50
0
0
50
1.00
43915--44029
59
1.9
59
87
3
169
34
21
2
40
1.67
49777--49831
21
2.7
21
94
2
94
18
27
20
34
1.95
49852--49904
20
2.7
20
93
0
97
33
20
20
24
1.97
50069--50129
18
3.0
21
72
18
56
26
37
14
21
1.92

Tables:   1

The End!