Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003056.1 Hibiscus syriacus cultivar Beakdansim tig00006372_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58407

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2015--2042
13
2.2
13
100
0
56
50
17
21
10
1.77
9802--9840
20
2.0
20
84
0
51
33
25
10
30
1.89
16750--16859
40
2.8
40
91
0
184
32
26
16
24
1.96
19024--19057
12
3.0
11
87
8
50
32
0
0
67
0.91
19031--19058
12
2.3
12
100
0
56
28
0
0
71
0.86
22017--22056
15
2.7
15
100
0
80
50
15
7
27
1.70
30028--30052
6
4.2
6
100
0
50
32
0
0
68
0.90
35873--35911
8
5.0
8
93
6
71
48
0
51
0
1.00
46000--46076
35
2.2
33
84
8
100
37
0
18
44
1.50
51433--51476
3
14.7
3
80
0
52
6
31
25
36
1.82
51429--51473
18
2.5
18
92
0
72
8
31
24
35
1.86
51819--51855
18
2.1
18
94
0
65
24
16
29
29
1.96
53531--53571
18
2.3
18
91
4
66
65
0
4
29
1.13
53617--53651
10
3.5
10
84
0
52
42
0
25
31
1.55
54874--54973
29
3.4
29
70
16
89
39
6
22
33
1.78
56974--57022
2
24.5
2
100
0
98
51
0
48
0
1.00

Tables:   1

The End!