Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003067.1 Hibiscus syriacus cultivar Beakdansim tig00006394_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82536

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--82
4
8.2
4
87
12
50
24
0
0
75
0.80
269--305
19
1.9
19
88
0
56
29
2
2
64
1.21
304--351
2
24.5
2
87
4
62
43
2
0
54
1.12
295--351
21
2.7
22
89
5
82
40
1
0
57
1.09
246--379
21
6.5
19
72
15
81
32
2
2
61
1.23
476--524
19
2.6
19
78
18
57
24
10
0
65
1.23
2463--2534
17
4.2
17
83
5
83
37
13
8
40
1.75
16155--16259
39
2.7
39
91
1
158
30
12
21
35
1.91
18474--18498
13
1.9
13
100
0
50
40
4
8
48
1.51
22785--22841
7
8.4
7
88
7
91
22
29
29
17
1.97
22789--22841
13
4.0
13
97
2
97
22
30
30
16
1.96
22785--22841
20
2.8
21
89
7
91
22
29
29
17
1.97
22831--22888
17
3.4
17
92
0
98
15
22
43
18
1.88
22882--22946
29
2.2
28
84
10
78
26
32
26
15
1.95
22884--22962
10
8.1
10
78
9
74
26
30
24
18
1.98
22884--22962
19
4.1
19
80
3
77
26
30
24
18
1.98
29958--30007
7
7.4
7
82
8
68
26
30
26
18
1.98
29962--30007
13
3.5
13
87
3
56
26
30
26
17
1.97
29958--30007
20
2.5
20
87
6
66
26
30
26
18
1.98
29997--30037
17
2.4
17
95
0
73
17
24
41
17
1.89
30031--30101
19
3.7
20
84
5
92
28
29
23
18
1.98
30033--30101
9
7.1
10
73
12
63
28
30
21
18
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44855--44899
2
22.5
2
100
0
90
48
0
0
51
1.00
46080--46115
6
6.0
6
96
0
63
19
0
0
80
0.71
46083--46122
18
2.2
18
86
0
53
22
0
2
75
0.93
46178--46229
9
5.6
9
78
17
52
21
23
0
55
1.43
52284--52388
52
2.0
52
96
3
194
36
22
18
22
1.95
54739--54776
14
2.7
14
95
0
67
21
21
5
52
1.66
56597--56636
12
3.6
12
83
12
50
45
5
0
50
1.23
56623--57065
22
20.6
22
83
9
434
40
0
9
49
1.36
56623--57065
44
10.3
44
84
8
590
40
0
9
49
1.36
56623--57065
66
6.9
66
85
8
556
40
0
9
49
1.36
56890--56914
12
2.1
12
100
0
50
48
0
0
52
1.00
56868--56936
34
2.0
34
97
0
129
40
0
7
52
1.29
57134--57169
17
2.1
17
89
0
54
19
11
8
61
1.54
60789--60826
13
2.9
14
88
11
55
42
13
5
39
1.66
61078--61135
17
3.4
17
97
0
107
58
6
0
34
1.25
63785--63835
14
3.4
14
76
23
59
52
1
21
23
1.57
63783--63845
31
2.0
31
100
0
126
47
3
22
26
1.66
64216--64613
36
11.1
36
81
2
390
39
17
11
31
1.85
65108--65134
2
13.5
2
100
0
54
51
0
0
48
1.00
65421--65523
19
5.4
19
79
4
82
40
22
7
29
1.82
65412--65530
38
3.1
38
77
1
103
44
20
7
27
1.78
65462--65529
19
3.6
19
81
0
91
44
23
7
25
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73630--73672
22
2.0
22
86
4
61
39
11
23
25
1.88
74759--75053
39
7.7
38
82
10
343
44
4
8
42
1.54
74759--75053
77
3.9
75
84
9
355
44
4
8
42
1.54
74759--75053
114
2.6
115
90
5
461
44
4
8
42
1.54
75017--75063
24
2.0
24
91
0
76
44
2
10
42
1.51
75194--75228
16
2.3
15
90
9
54
14
0
0
85
0.59
77581--77615
17
2.0
18
88
5
54
5
17
5
71
1.25

Tables:   1

The End!