Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003068.1 Hibiscus syriacus cultivar Beakdansim tig00006395_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55025

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1575--1638
22
2.9
22
73
13
60
57
3
0
39
1.14
2677--2767
46
2.0
44
89
6
139
35
10
14
39
1.81
23210--23244
2
17.5
2
100
0
70
51
0
0
48
1.00
24271--24302
15
2.0
17
88
11
50
25
3
3
68
1.18
25187--25241
28
2.0
28
82
3
67
45
1
3
49
1.30
28490--28522
14
2.5
13
90
9
57
57
0
0
42
0.98
43289--43351
24
2.8
22
72
11
65
38
4
0
57
1.20
43456--43498
16
2.6
16
85
7
52
58
4
4
32
1.39
46133--46256
25
5.0
25
93
2
198
29
15
20
34
1.93
46382--46427
15
3.0
15
79
20
51
65
0
0
34
0.93
46602--46886
40
6.4
43
64
19
136
26
17
29
25
1.98
46627--46828
91
2.2
91
97
0
377
28
16
28
25
1.97
46718--47018
141
2.2
134
80
7
343
26
17
28
27
1.98
47959--47994
8
4.5
8
86
13
56
11
13
0
75
1.06

Tables:   1

The End!