Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000307.1 Hibiscus syriacus cultivar Beakdansim tig00000577_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58485

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5537--5924
75
5.2
75
80
8
409
26
17
22
33
1.96
7976--8007
15
2.1
15
94
0
55
31
25
18
25
1.98
7953--8040
38
2.3
38
92
0
140
28
17
17
37
1.92
21890--22011
60
2.0
60
84
4
156
54
4
9
31
1.52
25138--25187
19
2.6
19
90
0
73
38
10
18
34
1.84
25219--25260
21
2.0
21
90
0
66
23
23
23
28
2.00
27462--27494
12
2.8
12
95
0
57
15
3
33
48
1.60
29501--29575
33
2.3
33
84
9
91
38
10
13
37
1.79
45139--45174
18
2.1
18
89
5
56
47
0
19
33
1.50
51782--51834
18
2.9
18
97
0
97
24
33
22
18
1.97
55584--55614
8
3.9
8
95
0
53
12
0
19
67
1.22
58100--58138
16
2.5
16
87
4
53
41
12
2
43
1.56
58167--58362
11
16.5
11
67
22
69
45
8
2
43
1.46
58290--58362
13
6.0
12
78
13
69
50
9
0
39
1.35
58286--58367
26
3.2
25
77
14
87
51
8
0
40
1.33

Tables:   1

The End!