Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003075.1 Hibiscus syriacus cultivar Beakdansim tig00006409_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66941

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2548--2637
36
2.5
36
83
1
108
30
17
12
40
1.86
2781--2968
65
2.9
65
84
10
258
26
17
14
41
1.88
13372--13429
13
4.2
13
70
12
53
27
17
20
34
1.95
19923--19953
14
2.2
14
94
0
53
19
32
16
32
1.94
25868--25902
15
2.2
16
90
5
54
48
0
8
42
1.33
26004--26206
66
3.1
66
86
0
289
26
11
26
35
1.91
34374--34435
30
2.0
30
84
3
79
41
9
17
30
1.82
36023--36071
17
2.9
17
81
0
62
59
6
8
26
1.50
40253--40296
21
2.1
21
95
0
79
27
25
25
22
2.00
40319--40361
21
2.0
21
90
0
68
30
20
20
27
1.98
42021--42055
13
2.7
13
95
0
61
8
11
45
34
1.71
43929--43968
19
2.1
19
90
9
64
30
0
0
70
0.88
43930--43969
3
13.0
3
85
15
55
32
0
0
67
0.91
46150--46208
28
2.1
27
87
3
82
32
5
0
62
1.17
46787--46860
36
2.1
36
84
0
94
40
22
12
24
1.88
47410--47450
7
6.0
7
81
13
50
14
14
14
56
1.69
50733--50762
8
3.8
8
90
0
51
83
0
16
0
0.65
50732--50762
16
1.9
16
100
0
62
83
0
16
0
0.64
54779--55222
112
4.0
112
93
1
730
37
15
20
26
1.93
54779--55222
225
2.0
224
91
2
730
37
15
20
26
1.93
55185--55466
82
3.3
83
67
20
211
37
14
18
29
1.90
63000--63024
13
1.9
13
100
0
50
32
0
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63008--63065
26
2.2
27
88
11
86
36
0
1
62
1.06

Tables:   1

The End!