Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003077.1 Hibiscus syriacus cultivar Beakdansim tig00006417_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69486

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8564--8595
15
2.0
17
88
11
50
68
3
3
25
1.18
9622--9660
2
19.5
2
100
0
78
48
0
0
51
1.00
14460--14490
13
2.4
13
94
0
53
67
0
3
29
1.06
21944--21987
3
14.7
3
95
0
79
36
0
34
29
1.58
30143--30234
46
2.0
45
89
4
141
40
14
10
34
1.81
33251--33298
18
2.7
18
93
6
80
25
10
25
39
1.87
35326--35369
22
2.0
23
86
4
63
52
0
2
45
1.13
37032--37125
31
3.0
31
92
3
145
37
23
19
20
1.94
37659--37701
20
2.1
21
87
8
63
32
11
6
48
1.66
37665--37711
20
2.2
20
85
7
58
36
12
6
44
1.68
38139--38183
21
2.1
21
87
0
63
15
24
28
31
1.96
39314--39503
37
4.9
41
77
14
127
46
5
3
44
1.43
39320--39528
114
1.8
114
85
7
298
45
5
3
45
1.43
39320--39528
77
2.7
73
84
10
235
45
5
3
45
1.43
39492--39548
26
2.3
26
87
6
82
42
5
1
50
1.35
39517--39592
36
2.0
39
92
7
131
47
1
0
51
1.09
39456--39582
62
2.0
64
84
6
170
44
3
1
49
1.30
39456--39594
64
2.2
64
83
7
176
45
3
1
49
1.28
39517--39617
39
2.7
36
80
13
98
47
1
0
49
1.19
44995--45668
334
2.0
336
98
0
1307
27
24
18
29
1.98
52854--52940
40
2.2
40
83
6
104
17
22
25
34
1.96
62685--62722
3
12.7
3
100
0
76
31
0
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65663--65694
2
16.0
2
100
0
64
50
0
0
50
1.00
65689--65720
16
2.0
16
93
0
55
40
0
6
53
1.26

Tables:   1

The End!