Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003078.1 Hibiscus syriacus cultivar Beakdansim tig00006418_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46515

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5717--5783
24
2.8
25
76
15
68
38
11
19
29
1.88
6973--7011
17
2.3
17
86
0
51
35
17
2
43
1.63
8932--8969
19
2.0
19
100
0
76
42
5
10
42
1.62
11186--11224
21
1.9
20
89
5
60
38
20
15
25
1.92
22677--22769
29
3.2
29
77
14
84
44
7
16
32
1.75
22908--22934
11
2.5
11
100
0
54
48
0
14
37
1.45
29490--29534
2
22.5
2
100
0
90
51
0
0
48
1.00
31638--31964
159
2.1
159
98
0
627
36
23
3
36
1.73
34879--34918
19
2.1
19
85
0
53
15
27
22
35
1.94
39155--39189
18
1.9
18
88
0
52
14
42
14
28
1.84
40151--40465
54
5.8
54
84
1
371
35
17
15
31
1.92
40113--40456
108
3.2
108
79
2
393
35
19
15
30
1.92
45353--45402
25
2.0
25
84
0
64
42
12
24
22
1.87
45883--45918
18
2.0
18
94
0
63
25
22
30
22
1.99
45887--45929
18
2.4
18
84
7
52
23
25
25
25
2.00

Tables:   1

The End!