Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003084.1 Hibiscus syriacus cultivar Beakdansim tig00006438_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56678

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3549--3592
23
1.9
23
85
0
61
31
29
6
31
1.84
6934--6966
11
3.0
11
90
0
57
66
0
9
24
1.20
9246--9285
19
2.1
19
85
0
53
17
7
5
70
1.30
29299--29381
26
3.2
25
69
17
69
67
0
7
25
1.16
29315--29389
27
2.8
27
72
23
86
65
0
5
29
1.15
29291--29415
53
2.4
48
78
11
124
64
0
9
26
1.24
31416--31450
3
12.0
3
93
6
63
0
34
0
65
0.93
31903--31970
20
3.3
20
71
16
52
32
10
29
27
1.90
37170--37286
32
3.7
32
89
1
182
21
26
29
22
1.99
39514--39735
116
1.9
115
87
2
320
36
15
22
26
1.93
39718--39750
14
2.4
14
95
5
59
42
24
15
18
1.88
55036--55077
19
2.2
19
95
0
75
45
19
4
30
1.71

Tables:   1

The End!