Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003091.1 Hibiscus syriacus cultivar Beakdansim tig00006450_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66195

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2198--2224
14
1.9
14
100
0
54
40
22
7
29
1.81
2356--2397
22
1.9
22
90
0
66
52
2
0
45
1.13
5506--5546
20
2.0
21
90
4
66
51
7
0
41
1.30
6772--6825
26
2.1
26
89
0
81
37
24
12
25
1.91
13257--13306
26
1.9
26
91
0
82
34
28
16
22
1.95
19129--19157
14
2.1
14
100
0
58
0
24
55
20
1.44
19156--19207
19
2.7
19
91
5
79
30
26
23
19
1.98
19160--19234
19
3.8
20
84
5
73
29
28
22
20
1.98
19165--19234
10
7.1
10
75
13
65
28
27
22
21
1.99
26353--26391
19
2.1
19
90
0
60
23
28
25
23
1.99
28055--28079
12
2.1
12
100
0
50
48
0
36
16
1.46
37496--37749
47
5.4
47
92
0
427
22
23
11
42
1.86
37497--37749
20
10.7
26
62
26
107
22
23
11
42
1.86
39788--39935
31
4.8
31
77
5
140
14
27
32
25
1.95
39803--39944
62
2.3
62
86
3
189
15
27
30
26
1.96
39848--39967
62
1.9
62
84
3
161
18
28
28
25
1.98
50657--50725
4
18.0
4
83
8
90
49
23
1
26
1.59
56557--56667
59
1.9
59
86
1
161
34
12
14
38
1.84
62809--62856
21
2.3
21
92
0
87
29
18
10
41
1.84

Tables:   1

The End!