Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003094.1 Hibiscus syriacus cultivar Beakdansim tig00006457_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19166

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1021--1075
19
2.8
20
88
5
85
34
23
23
18
1.96
1082--1158
32
2.4
33
86
2
102
15
23
19
41
1.89
3113--3164
20
2.7
19
88
5
77
34
25
25
15
1.95
3112--3209
20
5.6
17
67
25
62
39
23
22
14
1.90
3152--3227
30
2.4
32
85
8
95
44
22
21
11
1.84
3234--3328
18
5.7
18
74
20
89
12
18
22
46
1.83
3256--3312
14
3.8
14
78
17
69
10
17
24
47
1.79
3239--3328
32
2.8
32
94
1
153
12
17
22
47
1.80
3322--3366
19
2.3
20
80
7
56
13
22
26
37
1.91
3831--3874
18
2.5
18
85
3
63
15
15
40
27
1.88
5157--5194
20
1.9
20
88
0
58
50
21
15
13
1.78
5221--5271
19
2.7
19
100
0
102
9
21
27
41
1.84
5455--5498
22
2.0
22
95
0
79
18
15
45
20
1.85
5684--5735
19
2.7
20
90
3
79
25
19
26
28
1.98
5664--5777
20
5.7
20
77
7
79
23
17
22
35
1.95
5766--5858
20
4.5
21
78
4
100
17
24
18
39
1.91
5705--5839
41
3.3
41
82
4
139
19
21
20
38
1.94
5766--5858
41
2.3
41
100
0
186
17
24
18
39
1.91

Tables:   1

The End!