Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003100.1 Hibiscus syriacus cultivar Beakdansim tig00006473_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74965

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8056--8139
6
14.0
6
83
10
75
76
0
23
0
0.79
8884--8962
33
2.3
33
79
14
81
60
11
22
5
1.50
9875--9933
2
29.5
2
100
0
118
49
0
0
50
1.00
21313--21362
18
2.7
18
90
3
73
32
8
16
44
1.76
21938--22004
33
2.0
33
100
0
134
46
23
5
23
1.74
22314--22344
2
15.5
2
100
0
62
48
0
0
51
1.00
27071--27111
17
2.4
17
83
0
55
58
7
14
19
1.59
27083--27130
17
2.8
17
84
6
53
56
10
12
20
1.65
27113--27189
38
2.0
39
85
7
104
54
11
15
18
1.70
27988--28031
17
2.6
18
78
10
56
72
2
6
18
1.17
32005--33518
508
3.0
502
93
2
2627
29
21
8
39
1.84
33722--33767
23
1.9
23
82
8
56
43
21
0
34
1.53
46019--46096
6
12.8
6
87
5
86
75
0
24
0
0.80
46020--46099
11
6.8
11
82
12
72
76
0
23
0
0.79
46003--46096
44
2.1
45
84
5
129
75
0
23
1
0.87
46842--46921
36
2.3
33
80
18
83
61
11
22
5
1.49
47835--47893
2
29.5
2
100
0
118
49
0
0
50
1.00
59266--59315
18
2.7
18
90
3
73
32
8
16
44
1.76
59890--59956
33
2.0
33
100
0
134
46
23
5
23
1.74
60262--60300
2
19.5
2
100
0
78
48
0
0
51
1.00
65008--65048
17
2.4
17
83
0
55
58
7
14
19
1.59
65020--65067
17
2.8
17
84
6
53
56
10
12
20
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65050--65126
38
2.0
39
85
7
104
54
11
15
18
1.70
65925--65968
17
2.6
18
78
10
56
72
2
6
18
1.17
69848--70011
45
3.7
45
88
2
242
40
7
21
31
1.80
72857--72923
16
4.1
15
78
17
62
83
1
11
2
0.82
72857--72926
7
10.0
7
78
15
58
84
1
11
2
0.80
72867--72926
9
6.8
9
75
9
61
85
0
11
3
0.72
72857--72923
25
2.7
24
84
6
89
83
1
11
2
0.82
72857--72926
36
2.1
35
84
10
92
84
1
11
2
0.80

Tables:   1

The End!