Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003104.1 Hibiscus syriacus cultivar Beakdansim tig00006481_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72624

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2031--2085
21
2.6
21
91
5
85
36
21
16
25
1.94
5093--5127
18
1.9
18
100
0
70
22
0
37
40
1.55
15551--16224
182
3.7
181
88
2
901
41
14
16
27
1.87
20029--20074
19
2.4
19
88
0
74
34
2
13
50
1.53
20402--21557
199
5.8
197
83
5
1407
37
14
16
32
1.88
20403--21563
400
2.9
396
86
5
1507
37
14
15
32
1.88
24705--26059
200
6.8
198
85
4
1556
38
13
15
32
1.87
24705--26059
397
3.4
398
84
4
1641
38
13
15
32
1.87
30319--30838
200
2.6
198
83
6
631
40
12
15
31
1.85
30843--30904
23
2.7
23
100
0
124
35
22
9
32
1.87
30863--31028
87
1.9
87
96
0
305
31
14
12
41
1.82
33219--33532
157
2.0
157
96
0
583
35
17
12
33
1.88
53634--53683
21
2.3
22
86
10
68
32
18
28
22
1.97
54567--54655
32
2.9
30
88
3
124
26
20
19
33
1.96
59175--59213
19
2.1
19
90
9
62
33
2
0
64
1.08
62085--62122
20
1.9
20
88
0
58
21
26
10
42
1.85
66472--66531
21
2.9
21
92
0
84
16
25
33
25
1.96
66580--66649
29
2.4
29
100
0
140
47
20
7
25
1.75

Tables:   1

The End!