Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003111.1 Hibiscus syriacus cultivar Beakdansim tig00006503_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57890

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2220--2430
76
2.9
72
88
5
275
27
0
13
57
1.42
2357--2410
28
2.0
27
85
3
72
27
0
11
61
1.30
3569--3682
51
2.2
51
85
3
149
54
7
3
35
1.45
4228--4289
27
2.3
27
97
0
115
29
16
20
33
1.94
6638--6678
20
2.0
21
90
4
66
60
0
0
39
0.96
7815--7844
15
2.0
15
93
0
51
40
0
56
3
1.16
9603--9696
24
3.9
24
72
0
71
24
23
19
32
1.97
15602--15645
4
11.0
4
85
9
54
68
0
0
31
0.90
16755--17174
84
5.1
83
77
6
370
25
20
25
30
1.99
17370--18785
106
13.4
106
95
0
2409
22
18
25
33
1.97
22540--22604
33
1.9
34
81
9
80
72
1
9
16
1.18
22740--22791
4
13.0
4
88
8
70
69
0
0
30
0.89
22790--22846
30
1.9
30
85
0
78
68
5
15
10
1.36
22790--22851
29
2.1
30
81
3
72
67
6
14
11
1.40
23857--24153
102
2.9
102
77
3
301
36
9
9
44
1.69
24397--24485
28
3.2
28
64
17
76
51
12
5
30
1.62
24380--24489
56
2.0
56
100
0
220
53
10
5
30
1.58
28914--28979
25
2.6
25
97
0
123
18
22
13
45
1.84
33791--33834
21
2.1
21
83
8
54
36
6
2
54
1.40
33852--33881
2
15.0
2
100
0
60
50
0
0
50
1.00
46776--46813
18
2.3
16
86
13
51
52
0
0
47
1.00
46947--46975
10
2.9
10
100
0
58
68
0
0
31
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49923--49967
21
2.1
21
87
0
63
31
6
6
55
1.52
50136--50187
15
3.2
17
77
22
67
36
19
0
44
1.51
50130--50177
14
3.2
14
76
23
53
37
16
0
45
1.48
53789--53874
20
4.3
20
82
8
113
32
20
12
33
1.91
54618--54687
22
3.2
22
72
8
61
27
15
20
37
1.93
54713--54775
4
15.8
4
96
0
117
26
0
22
50
1.49

Tables:   1

The End!