Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003114.1 Hibiscus syriacus cultivar Beakdansim tig00006520_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89426

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14441--14466
2
13.0
2
100
0
52
50
0
0
50
1.00
18630--18980
175
2.0
175
97
0
666
27
24
16
32
1.96
22600--22672
23
3.2
22
65
27
53
36
5
26
31
1.79
22547--22717
46
3.8
45
84
3
209
38
7
23
31
1.81
26042--26115
33
2.2
33
87
4
103
64
14
1
18
1.35
26042--26134
33
2.7
34
81
5
98
64
11
4
19
1.43
26600--26659
30
2.0
30
83
6
77
21
20
41
16
1.90
46495--46557
23
2.6
24
82
12
85
80
0
14
4
0.86
46495--46553
12
4.8
12
83
10
75
83
0
13
3
0.78
46496--46553
8
7.1
8
74
18
57
84
0
12
3
0.74
46524--46553
15
2.1
15
93
6
53
90
0
10
0
0.47
47519--48009
136
3.6
135
89
1
734
34
17
22
25
1.96
47519--48009
271
1.8
270
88
2
752
34
17
22
25
1.96
79488--79527
2
20.0
2
100
0
80
50
0
0
50
1.00
79898--79924
2
13.5
2
100
0
54
48
0
0
51
1.00
81280--81325
18
2.6
18
89
6
67
36
4
6
52
1.47
82934--83157
117
1.9
117
83
5
292
47
8
14
29
1.74
83540--83585
20
2.2
21
96
3
85
36
4
4
54
1.40

Tables:   1

The End!