Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003121.1 Hibiscus syriacus cultivar Beakdansim tig00006536_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67726

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2999--3041
20
2.1
21
87
8
63
18
13
0
67
1.23
2998--3047
20
2.5
20
75
15
59
18
18
0
64
1.30
6872--6905
17
2.1
16
88
5
50
14
8
0
76
1.01
18968--19020
20
2.6
21
84
3
72
52
3
1
41
1.30
26693--26722
2
15.0
2
100
0
60
0
50
0
50
1.00
26722--26758
2
18.5
2
100
0
74
48
0
0
51
1.00
27619--28022
43
9.3
42
73
12
207
49
7
17
25
1.73
27688--28019
44
7.7
43
74
13
218
48
8
17
25
1.75
27601--28026
87
4.9
87
75
10
259
49
7
17
24
1.72
27647--27937
132
2.2
128
86
4
395
48
8
17
25
1.75
27662--28044
43
8.9
42
74
12
260
49
7
16
26
1.72
44428--44458
14
2.2
14
94
0
53
32
0
16
51
1.44
45086--45161
35
2.2
35
97
0
143
28
19
14
36
1.91
45229--45258
2
15.0
2
100
0
60
50
0
0
50
1.00
59505--59543
18
2.2
18
85
0
51
46
0
2
51
1.14
65566--65608
12
3.4
13
78
15
54
58
2
0
39
1.11
65843--65877
18
1.9
18
88
0
52
48
11
17
22
1.79

Tables:   1

The End!