Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003126.1 Hibiscus syriacus cultivar Beakdansim tig00006547_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64817

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6860--7131
55
5.0
55
87
1
368
27
25
13
33
1.94
6898--8093
55
22.1
54
81
8
1172
24
25
16
33
1.96
7102--8093
324
3.1
324
89
4
1461
23
25
17
33
1.96
10774--10818
5
8.2
5
83
16
54
0
24
0
75
0.80
10774--10818
11
4.1
11
83
8
56
0
24
0
75
0.80
10774--10818
17
2.7
16
86
10
63
0
24
0
75
0.80
10774--10818
22
2.0
22
87
8
65
0
24
0
75
0.80
10775--10838
25
2.7
23
81
11
76
3
26
0
70
1.02
13386--13437
19
2.7
20
85
11
81
11
25
19
44
1.84
13385--13457
19
4.1
17
78
14
76
10
23
21
43
1.84
13445--13493
21
2.3
21
96
0
89
12
28
18
40
1.86
13410--13478
37
1.9
35
88
5
102
11
24
21
42
1.86
18790--18951
65
2.5
65
85
1
218
30
26
15
27
1.96
26300--26343
21
2.1
21
86
0
61
9
36
15
38
1.80
27045--27084
20
2.0
21
85
14
57
42
5
7
45
1.54
27301--27462
65
2.5
65
85
1
218
30
25
16
27
1.96
33525--33814
37
8.1
37
70
20
149
43
2
5
47
1.40
33540--33815
35
7.8
37
72
18
153
43
2
5
47
1.41
33567--33778
102
2.1
98
86
4
300
46
3
4
45
1.40
33679--33773
38
2.6
37
79
15
117
50
2
2
45
1.25
33809--33849
9
4.4
9
84
6
55
19
0
0
80
0.71
33816--33862
19
2.7
17
84
15
69
21
0
0
78
0.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33817--33856
19
2.1
19
95
0
71
22
0
0
77
0.77
35165--35229
2
33.0
2
87
3
87
46
3
0
50
1.17
35281--35348
20
3.3
20
78
15
59
22
2
4
70
1.18
35317--35395
39
2.1
39
81
11
92
17
7
2
72
1.20
38357--38539
93
2.0
92
86
1
258
32
15
19
32
1.93
39768--40757
165
6.0
164
82
5
1116
31
24
20
24
1.98
39724--40708
249
4.0
248
84
3
1142
30
24
20
25
1.98
39724--40708
84
11.9
84
80
5
1040
30
24
20
25
1.98
41345--41546
37
5.4
37
77
11
171
45
3
5
44
1.46
41478--41503
12
2.2
12
100
0
52
38
7
7
46
1.61
41336--41546
113
1.9
113
88
5
320
44
3
6
45
1.48
41502--41608
55
2.0
53
89
10
166
51
1
0
46
1.11
41694--41746
22
2.5
20
80
17
61
18
1
0
79
0.83
43049--43101
2
27.0
2
88
3
72
45
1
0
52
1.11
43146--43213
20
3.3
20
78
15
68
25
2
2
69
1.17
46500--46550
19
2.6
20
90
3
77
15
17
23
43
1.88
49680--49786
31
3.4
31
74
13
94
30
17
17
33
1.94
49698--49802
31
3.4
30
81
6
111
31
17
20
30
1.96
49681--49802
63
2.0
62
82
8
149
31
18
19
31
1.96
50634--50683
19
2.6
19
93
0
82
32
16
10
42
1.81
56036--56069
14
2.5
14
90
4
52
50
2
0
47
1.16
56306--56337
2
17.0
2
87
12
50
53
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62899--62930
2
16.0
2
93
0
55
50
0
3
46
1.17

Tables:   1

The End!