Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000313.1 Hibiscus syriacus cultivar Beakdansim tig00000590_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122592

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7290--7322
15
2.2
15
94
0
57
9
21
63
6
1.45
10655--10696
22
1.9
22
90
0
66
45
16
9
28
1.79
14371--14439
31
2.3
30
84
2
93
31
8
27
31
1.87
14677--14742
29
2.3
29
89
7
100
51
9
4
34
1.54
26956--26986
6
5.2
6
100
0
62
0
51
0
48
1.00
26956--26994
18
2.2
18
90
0
60
2
51
0
46
1.14
28498--28556
31
1.9
31
92
0
100
38
10
8
42
1.69
32424--33142
227
3.1
229
96
1
1318
45
7
7
38
1.62
33191--33237
20
2.4
19
86
10
67
55
8
17
19
1.67
33373--33419
20
2.4
19
82
10
67
53
10
17
19
1.72
33382--33424
20
2.3
19
88
11
63
51
11
16
20
1.75
34554--34617
23
2.8
23
90
0
101
35
4
21
37
1.75
34025--35501
480
3.1
481
96
1
2733
40
7
10
40
1.69
35034--35097
23
2.8
23
85
0
92
34
4
23
37
1.76
44857--44895
2
19.5
2
100
0
78
51
0
0
48
1.00
48384--48423
2
20.0
2
89
0
62
0
50
5
45
1.23
51986--52019
4
8.0
4
87
12
50
23
2
0
73
0.97
54214--54252
17
2.3
17
86
0
51
20
2
2
74
1.06
62283--62343
32
1.9
32
86
0
86
50
3
6
39
1.45
64316--64350
2
18.0
2
88
5
54
48
2
0
48
1.16
65539--65601
2
34.0
2
81
15
82
44
0
1
53
1.10
65522--65601
27
3.2
26
81
15
89
41
1
2
55
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65632--65682
18
2.8
18
75
0
57
25
7
0
66
1.18
65839--65863
2
12.5
2
100
0
50
48
0
0
52
1.00
66044--66087
5
8.6
5
80
5
52
18
2
2
77
0.98
66031--66102
26
2.9
24
78
13
74
16
1
8
73
1.14
66045--66124
11
7.0
11
76
16
56
15
3
3
77
1.05
66044--66090
21
2.2
20
82
10
58
19
2
2
76
0.99
66044--66110
33
2.1
32
83
10
84
14
2
4
77
1.05
67109--67152
20
2.2
20
100
0
88
20
9
0
70
1.14
67107--67146
10
4.0
10
86
0
62
20
15
0
65
1.28
77197--77953
105
7.2
105
95
0
1282
34
25
17
22
1.96
78213--78249
2
19.0
2
88
5
58
48
2
0
48
1.15
78220--78256
19
1.9
19
88
0
56
48
8
0
43
1.32
79894--79942
5
9.6
5
78
12
55
18
2
4
75
1.06
79881--79950
31
2.3
31
85
9
90
17
1
8
72
1.16
79898--79945
21
2.3
21
82
7
62
18
2
4
75
1.07
80402--80429
2
14.0
2
100
0
56
50
0
0
50
1.00
81236--81268
3
11.0
3
93
0
57
63
0
0
36
0.95
84474--84678
100
2.0
101
98
0
394
30
25
21
22
1.99
87149--87216
23
3.2
23
62
23
58
13
10
17
58
1.62
87137--87216
40
2.0
40
100
0
160
12
10
15
62
1.54
91926--92124
75
2.6
76
87
2
276
20
24
32
22
1.98
94691--94730
21
1.9
21
89
0
62
10
25
40
25
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94713--94772
19
2.9
20
85
9
68
16
26
35
21
1.95
98570--98609
21
1.9
21
85
10
55
35
10
2
52
1.48
100533--100714
75
2.4
76
85
2
249
21
23
30
23
1.99
104263--104295
17
1.9
17
93
0
57
39
24
18
18
1.92
111752--111888
60
2.3
60
78
7
145
35
18
13
32
1.91

Tables:   1

The End!